rs30524409 SNP Detail

Summary

• ID
  rs30524409
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:104730332 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTCTC ATTCAGCCTG GAACAGCTGG
  M
  AGATCAAGTA AATTGTCTAC ATCGA                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss46415730	mCV24900700	ABI	CRAMUS_MOUSE	f	SNP	A	A	C
ss136901025	ENSMUSSNP3702529	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
ss323170391	CHEV_9_104755463	CHEVERUD	SCREENING_POP	f	SNP				A	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs30524409					SNP	A	A	C	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:104730332 () rs orientation: forward

Symbol	Name	Function Class
Cpne4	copine IV	within coordinates
Rr198572	regulatory region 198572	69 bp proximal
Tssr86829	transcription start site region 86829	1324 bp upstream