rs30524519 SNP Detail

Summary

• ID
  rs30524519
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:44387869 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TTTTTTTCTT TTCTTTAAAT GGAATGTTCC AGGCTCAGAA GGTAGAGGCA GGCAGATCTC
  TAAGTCTGAG GTCAGCCTGG TCTACAGAGT AAGTTTCAGG ACAGGCAGGC CTACACAGAG
  GAACTCTGTC CTCGGGTTTG GGGGAGAGGA ATGCCTTAAG AATTTGTGTG TCATTTTTGT
  GCAGGGGCCC TGCTAATCTT CTCTGTAACA TTTTTATTTA TTTGGGCATG GGGGTGGGAG
  GTCCTGTCTC CACACGCATG CCATAGAACA GTGTGTGAGA CTTCTCTCCT TCTGCCATGC
  R
  GGTCTCTGGG ATGGAGCTCA GGTCGTCAGA CTTAGCAACA AGCACCTTTA CCCACTGGCC
  GTCTTTTTTT CTTTTTCTTT TTTAACATTT GAAGAAACAG GCCTGGAAAG TGATTAGGCC
  GGGACCTTTC AGACCAGTCT TTCCTTGGGA GAATTTATTA TTTCCTTGAA GAACATAGAG
  AGGGCAACCT CAGAAGTCTC TCTGGCAGAA CTCTCCTGCT ACGGCTTCTA GCAGATGTAT
  ACTGTCTCCC TGAGTTCCAC AGAAGTCAAG ATGATGCTTC CTGGTCATGC TTAGCTCAAG
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss46415933	mCV25082837	ABI	CRAMUS_MOUSE	f	SNP	A	G	G
ss136396105	ENSMUSSNP2760202	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs30524519					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:44387869 () rs orientation: forward

Symbol	Name	Function Class
C030014I23Rik	RIKEN cDNA C030014I23 gene	within coordinates
Cpgi21659	CpG island 21659	1868 bp proximal
Gm10023	predicted gene 10023	1352 bp downstream
Gm22540	predicted gene, 22540	57 bp upstream
Gm47204	predicted gene, 47204	140 bp downstream
Rr195028	regulatory region 195028	269 bp distal
Rr203857	regulatory region 203857	303 bp distal
Rr206312	regulatory region 206312	931 bp proximal
Rr209142	regulatory region 209142	1669 bp distal
Rr209143	regulatory region 209143	within coordinates