rs30534689 SNP Detail

Summary

• ID
  rs30534689
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:66316049 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CATCCCACCA GAAGTGAATG AAGATTCTAG GTTCTCTGTC
  AGCACTGCTC TAGTTAGCTC GGTTAACTTG ACATAGCCTA GAGTCACCTC AGAAGGGAGT
  Y
  TAATCTGAGG GATTGCTGAG ATAAGATTGG CTGTGGTGTA TCTTTCTGGG GGTGGGGTGG
  GGTGGTGGTC TTGACTGGTC ATTGATGTAG AAGGGTGCA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39195177	mCV22340234	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	C	T
ss139635638	ENSMUSSNP1896425	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	C		T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30534689					SNP	T	T	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:66316049 () rs orientation: forward

Symbol	Name	Function Class
Adam2	a disintegrin and metallopeptidase domain 2	867 bp upstream
Rr494196	regulatory region 494196	687 bp distal
Tssr129281	transcription start site region 129281	860 bp upstream
Tssr129282	transcription start site region 129282	839 bp upstream
Tssr129283	transcription start site region 129283	826 bp upstream
Tssr129284	transcription start site region 129284	809 bp upstream