rs30535956 SNP Detail

Summary

• ID
  rs30535956
• Variation Type
  SNP
• Alleles
  A/C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:3050548 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  GAATATTTAG AAATGTCCAC TGTAGGAGGT GGAATATGGC AAGAAAACTG AAAATCATTG
  AAAATGAGAA ACATCCACTT GACGACTTGA AAAATGACGA AATCACTAAA AAACGTGAAA
  AATGTGAAAT GCACACTGAA GGACCTGGAA TATGGCGAGA AAACTGAAAA TCAAGGAAAA
  TGAGAAATAA ACACTTTAGG ACGTGAAATA TGGCGAGGAA AACTGAAAAG GGTGGAATAT
  TTAGAAATGT CCACTGTAGG ACGTGGAATA TGGCAAGAAA CGTGAAAATC ATGGAAAATG
  V
  GAAACATCCA CTTGACGACT TGAAAAATGA CGAAATCACT AAAAAACGTG AAAAATGAGA
  AATGCACACT GAAGGACCTG GAATATGGCG AGAAAACTGA AAATCACGGA AAATGAGAAA
  TACACACTTT AGGACGTGAA ATATGGCGAG GAAAACTGAA AAAGATGGAA AATTTAGAAA
  TGTCCACTGT AGGACGTGGA ATATGGCAAG AAAACTGAAA ATCATGGAAA ATGAGAAACA
  TCCACTTGAC GACTTGAAAA ATGACGAAAT CACTAAAAAA CGTGAAAAAT GAGAAATGCA
                                                                   
  
  V = A/C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss46417870	mCV25355330	ABI	CRAMUS_MOUSE	f	SNP	A	C
ss46433362	mCV22772941	ABI	CRAMUS_MOUSE	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs30535956					SNP	A	?

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:3050548 () rs orientation: forward

Symbol	Name	Function Class
Tssr4284	transcription start site region 4284	1778 bp downstream
Tssr4285	transcription start site region 4285	1753 bp upstream
Tssr4286	transcription start site region 4286	1649 bp downstream
Tssr4287	transcription start site region 4287	1614 bp upstream
Tssr4288	transcription start site region 4288	1586 bp downstream
Tssr4289	transcription start site region 4289	1491 bp upstream
Tssr4290	transcription start site region 4290	1484 bp downstream
Tssr4291	transcription start site region 4291	1404 bp upstream
Tssr4292	transcription start site region 4292	1368 bp downstream
Tssr4293	transcription start site region 4293	1333 bp upstream
Tssr4294	transcription start site region 4294	1331 bp downstream
Tssr4295	transcription start site region 4295	1258 bp upstream
Tssr4296	transcription start site region 4296	1295 bp downstream
Tssr4297	transcription start site region 4297	1231 bp upstream
Tssr4298	transcription start site region 4298	1213 bp downstream
Tssr4299	transcription start site region 4299	1173 bp downstream
Tssr4300	transcription start site region 4300	1135 bp downstream
Tssr4301	transcription start site region 4301	1117 bp upstream
Tssr4302	transcription start site region 4302	1105 bp upstream
Tssr4303	transcription start site region 4303	1050 bp downstream
Tssr4304	transcription start site region 4304	1021 bp upstream
Tssr4305	transcription start site region 4305	952 bp downstream
Tssr4306	transcription start site region 4306	933 bp upstream
Tssr4307	transcription start site region 4307	912 bp downstream
Tssr4308	transcription start site region 4308	880 bp upstream
Tssr4309	transcription start site region 4309	836 bp upstream
Tssr4310	transcription start site region 4310	789 bp downstream
Tssr4311	transcription start site region 4311	761 bp upstream
Tssr4312	transcription start site region 4312	681 bp downstream
Tssr4313	transcription start site region 4313	622 bp upstream
Tssr4314	transcription start site region 4314	610 bp downstream
Tssr4315	transcription start site region 4315	586 bp downstream
Tssr4316	transcription start site region 4316	559 bp upstream
Tssr4317	transcription start site region 4317	483 bp downstream
Tssr4318	transcription start site region 4318	459 bp upstream
Tssr4319	transcription start site region 4319	402 bp upstream
Tssr4320	transcription start site region 4320	338 bp downstream
Tssr4321	transcription start site region 4321	310 bp upstream
Tssr4322	transcription start site region 4322	211 bp downstream
Tssr4323	transcription start site region 4323	176 bp upstream
Tssr4324	transcription start site region 4324	146 bp downstream
Tssr4325	transcription start site region 4325	95 bp downstream
Tssr4326	transcription start site region 4326	57 bp upstream
Tssr4327	transcription start site region 4327	54 bp downstream
Tssr4328	transcription start site region 4328	within coordinates
Tssr4329	transcription start site region 4329	within coordinates
Tssr4330	transcription start site region 4330	129 bp upstream
Tssr4331	transcription start site region 4331	153 bp downstream
Tssr4332	transcription start site region 4332	259 bp downstream
Tssr4333	transcription start site region 4333	271 bp upstream
Tssr4334	transcription start site region 4334	293 bp downstream
Tssr4335	transcription start site region 4335	440 bp downstream
Tssr4336	transcription start site region 4336	444 bp upstream
Tssr4337	transcription start site region 4337	517 bp downstream