rs30536450 SNP Detail

Summary

• ID
  rs30536450
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:140590381 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGAACCGGG TACTGGAGTA
  TGTCACCCAG GCCTCGGGCG GTCTGCAGCT GTTGAGAGAC CATACACATG TACAAGATGA
  TCTGGGGGGG CGGGGTTTCA CAGATGACCA GACATGTCCC CCAAGGTTGC ATAGCACCTA
  GGTGGGGAGG TGAGCGCTCT TGTCTGCTTC CAAAGACTAC ACTTATGGCT TCCTCTCCCC
  Y
  GTAGCTCCCT CCAGAGAGGG CTCCAACCAC CCTGTCACCG GCTCACTGAC CTAGTCCTCC
  AGAGTCCAGA ATCTCATGGC TGGACTGGTT CCCTGGGTGC GTCTCCTCTC TGGACTCTGA
  GAAGAATGGC ATAGACAGAG ATGAACTTGG CCTTGGAGTT TACCTGCGCC GTTGAGATTC
  CCAGAGAAGC TCAGAGCAGC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46417479	mCV22971607	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	C	C
ss147716728	ENSMUSSNP5382435	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	C		C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30536450					SNP	T	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:140590381 () rs orientation: forward

Symbol	Name	Function Class
Gm69366	predicted gene, 69366	within coordinates
Rr377299	regulatory region 377299	within coordinates