rs30547873 SNP Detail

Summary

• ID
  rs30547873
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:10158085 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGACA CAGTATATCT TTTTAATCTC
  Y
  CCCCACCTTA TAGTTTGAGA TAAGG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45440205	mCV25352589	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	T
ss134580079	ENSMUSSNP1035821	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C		T
ss320652927	CHEV_3_10093025	CHEVERUD	SCREENING_POP	f	SNP					C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30547873					SNP	C	C	T	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:10158085 () rs orientation: forward

Symbol	Name	Function Class
Myef2l	myelin expression factor 2 like	463 bp downstream
Rr573569	regulatory region 573569	85 bp distal