rs30548043 SNP Detail

Summary

• ID
  rs30548043
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:144055538 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCTTT CATGACAATG GGTGGGAGCC
  R
  CCAGATGTAG GTTCTGAGAA CTGAA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss44938965	mCV23179145	ABI	CRAMUS_MOUSE	f	SNP	G	A	G	G
ss145634707	ENSMUSSNP2990322	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A		G
ss320011876	CHEV_1_146026930	CHEVERUD	SCREENING_POP	f	SNP					A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30548043					SNP	G	A	G	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:144055538 () rs orientation: forward

Symbol	Name	Function Class
Rr12883	regulatory region 12883	within coordinates
Rr30963	regulatory region 30963	793 bp distal
Rr396359	regulatory region 396359	1995 bp downstream
Rr396360	regulatory region 396360	1260 bp downstream