rs30549043 SNP Detail

Summary

• ID
  rs30549043
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:146470976 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GAACCACAGA AAGTTGTTTT GTCTATCATA GCTGGCCACC
  AGTTTCTGCC CTCAGTGCTG TGGTTACAGG CTCATGAAGC CATGCTGAGC TTTTATGTGG
  R
  TCTTGGATCT TAGCTCAGGC CCTCATGCTT GCACACACTC TTTCTCATGG AGCCACCTCC
  CAGGCTATAC ACATTAAGTC TGATCTTACC CATTACCTT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45439731	mCV25106387	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	G	A
ss136046205	ENSMUSSNP2517462	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	G		A
ss321011059	CHEV_3_146428185	CHEVERUD	SCREENING_POP	f	SNP						A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30549043					SNP	G	G	G	G	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:146470976 () rs orientation: forward

Symbol	Name	Function Class
Gm40170	predicted gene, 40170	within coordinates
Prkacb	protein kinase, cAMP dependent, catalytic, beta	Intron
Rr587079	regulatory region 587079	1832 bp distal
Rr587080	regulatory region 587080	within coordinates
Rr587081	regulatory region 587081	984 bp proximal