rs30549566 SNP Detail

Summary

• ID
  rs30549566
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  127
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:50146881 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TAACTTGTCT TGGCAAAAGA ACCTTCACTG CCTATGTATG TGTGGTGGCC AGCAGTAGCC
  AACTGCCACT CTGCAACTGC CACTCTGCAA CGGCTTCCCA CACTCCTCCA TTGTTGGTGG
  GATTGCAAGC TTGTACAACC ACTCTGGAAT TCAGTCTGGC GGTTCCTCAG AAAATTGGAC
  ATATTACTAC CGGAAGATCC AGCAATACCT CTTCTGGGCA TATATCCTGA AGATGCCCCA
  ACCGGTAAGA AGGACACATG CTCCACTATG TTCATAGCAG CCTTATTTAT AATAGCCAGA
  W
  GCTGGAAAGA ACCCAGATGC CCCTCAACAG AGGAATGGAT ATAGAAAATG TGGTACATTT
  ACACAATGGA TTACTACTCA GCTATTAAAA AGAATGGATT TATGAAATTC CTAGGCAAAT
  GGATGGACCT GGAGGGCATC ATCCTGAGTG AGGTAACTTA GTCACAAAGG AACTCACACA
  ATATGTACTC ACTGATAAGT GGATATTAGC CCAGAAACTT AGGATACCCA AGATATAAGA
  TACAATTTGC TAAACACATG AAACTCAAGA GAACAAAGAC CAAAGTGTGG ACACTTTGCT
                                                                   
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss44938475	mCV23594143	ABI	CRAMUS_MOUSE	f	SNP	T	A	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30549566					SNP	T	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:50146881 () rs orientation: forward

Symbol	Name	Function Class
4933411E06Rik	RIKEN cDNA 4933411E06 gene	within coordinates