rs30551818 SNP Detail

Summary

• ID
  rs30551818
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:39264743 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATCAGGTGT CTTAGACTTT
  CATTCATAAA CTTTTCCCTT GAGACCAATT CTTCTACTGA GTCTGGAGCA GGACTGGAAG
  CAATCCAGCC TCAGAGATTT CCCCCGCTCC CAGTACTGTG CTGGGGTTAC AGGCTTGTGC
  ATGGCCACAC CTAGCCAGTT TTTATTGGTT TTGTTTGTTT GTTTTTATTT TTACTTGAAT
  R
  CTGGGGATGT TTGGGATCTG AGCTCAGCTC GTCCTGCTTG CACAACAAGA GGGGTTACCC
  ATGAAGCCTC CTCCATCTCT ATTCCACAGG CACTGCTTCA TGTGCTGGAG ATACAGTAGT
  TATGACTGGG AAAGTCCCAA TGGACAAAGG CTGAGAGATG GATCACTTGG TGCTTCTGCA
  CTCAATCCCA GCACTCACAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45440545	mCV24355735	ABI	CRAMUS_MOUSE	f	SNP	G	A	G	G
ss134849793	ENSMUSSNP2842404	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30551818					SNP	G	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:39264743 () rs orientation: forward

Symbol	Name	Function Class
Rr575740	regulatory region 575740	1607 bp distal
Rr575741	regulatory region 575741	451 bp distal
Rr575742	regulatory region 575742	1133 bp proximal