rs30552619 SNP Detail

Summary

• ID
  rs30552619
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:27368716 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCATGACTGC ACTCCTAAGA
  CTTATTGTAG AGTAGCAGAG GCTGGCACAT GCACAGCTCT GACTTGCAGA TTTTCATAGT
  GCGAGCATGC CAGTCAATAT TTGGTTAGAG AATCTATAAA AAGATTAAAG CAGAGACTCA
  TAAATGGTCG AAGTGCCAAG TGTTAGTGAC TCTAGGTACC TAGCTGTGAT ATCAACCTCC
  Y
  ATCTTCCTGA AAGTTTAGAG AACTTCCAGG AAGAGAGAGC AGAATGACTG ATGGGGCCTT
  AAGATAGGGG TGAGAACTGT GGGAGGCTGT CATTTGGATA CAACATGGCT GTATCACATA
  TCAGTTCACA GCAGCTATGG TTACCTGCAG AAGATCAGCC AGTCAACATC CCAGCACAGA
  GGGGGTGGGG CTCTCAAAGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45439569	mCV24241793	ABI	CRAMUS_MOUSE	f	SNP	T	C	C	C
ss134703841	ENSMUSSNP4082663	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30552619					SNP	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:27368716 () rs orientation: forward

Symbol	Name	Function Class
Rr574391	regulatory region 574391	315 bp proximal