rs30553798 SNP Detail

Summary

• ID
  rs30553798
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:76128618 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACCCATCTG TGATTCATAT
  TTTTTAGACA ACCTGAATTC TTTTTCTTTC TCTCCCCTCA CCCTGTAAGA ACTAACTGAA
  AGAGCCTTGA GGAGGACAGG ACCAAGAAAC CACTGTGTGG CCGAGGCAAA CATTTGGGGC
  ACAGTGAAAT GGCAGAAGCA GGTGGCTTTA CAGGAGGGGC AAATGATGCT AAAGTCACAC
  R
  AGGAACAGTT ATTCCCCAGA GCTCACGTGC CTGTCCGGTT TCTGCCTCCT GATCTCAGTG
  GGATGCAGAT AGGTGAGTTT TAGCGCAGGG CCTCTGCCGT GTGCAGTCTT TTGATGGGAC
  CACAGAGCAA AGCCTTCTTC AGACCACTTT TGAACCAGTT GTAAAACCAG GAGGACATTA
  GAAATTAGTT TCCCAACCTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39198045	mCV25099790	ABI	CRAMUS_MOUSE	f	SNP	A	G	G	G
ss139752794	ENSMUSSNP6528666	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30553798					SNP	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:76128618 () rs orientation: forward

Symbol	Name	Function Class
Gm52138	predicted gene, 52138	1138 bp upstream
Gm62917	predicted gene, 62917	within coordinates
Rr296309	regulatory region 296309	898 bp proximal
Rr300347	regulatory region 300347	1417 bp proximal