rs30553843 SNP Detail

Summary

• ID
  rs30553843
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:56632431 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGGAG GGAACCTCAA TCATGAAAAT
  K
  CTTCCATAAG ATTTGCTGTA GTAAA                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45440269	mCV23384121	ABI	CRAMUS_MOUSE	f	SNP	G	T	T
ss135195083	ENSMUSSNP114736	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		T
ss320778035	CHEV_3_56528932	CHEVERUD	SCREENING_POP	f	SNP				T	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30553843					SNP	G	T	T	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:56632431 () rs orientation: forward

Symbol	Name	Function Class
Rr75870	regulatory region 75870	100 bp distal
Rr375010	regulatory region 375010	within coordinates