rs30555528 SNP Detail

Summary

• ID
  rs30555528
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:115573078 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTAACTTCA ACTCCAGGAG
  GTCTAGCTCC CTCTTCTGAC CTCCAGCCCC TCATCCCTGT GCAAGTGCAC ACACAAAATT
  AAAAATGAAA ATGAAACCTT TAAAGATCGC TGATCACTAT GCTACGGAAA CACCTCACTG
  TCTTTATTAT TTGTGTAAGA AATGCAGATA TTTGGGGGGC CAGGAAATGG CTATGTTCAG
  Y
  GGATGAGAGC TTATACAGCA CTCCCAAGGC CCTGAGAGGC AGAGCAACGG GAGGAGCAGA
  GAACAGTAAA ATGATCTCTA AAACTTACAG ACAGCATCAG AAAACAAGCT ATGAACATTA
  GAATCATGGC AAATGATCAA TAAGGCAAGT AAAACAGCCT GGAATATTCG TTCCTCGATC
  AAGATCTCTA CAGTCCTAAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J
ss45441834	mCV24999930	ABI	CRAMUS_MOUSE	f	SNP	C	T	T
ss135665606	ENSMUSSNP3750362	ENSEMBL	ENSEMBL_Sanger	f	SNP	C		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J
rs30555528					SNP	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:115573078 () rs orientation: forward

Symbol	Name	Function Class
Rr583598	regulatory region 583598	157 bp distal