rs30556547 SNP Detail

Summary

• ID
  rs30556547
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr14:70439361 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATGACTTAA AATGAATTTT
  AAGAGGATTT TGTTTGGAGC AATCTGTGTT CATCCCCAAC CCATTCTGTT TTCCTCGGAC
  AGTCCTAAGT GTTTGCAGAA GGGAAGGCTG GGGAAGAGTA CTTGAAGCAG ATGCTAGGGG
  CATCCCAGTT AGGGTGTGGC AAGGCTGACT CTGGGCTGTA GGGGATTGGC TGGGCTAGGC
  R
  GATGGGGGAT ACAGACTTAA ATTTAGACTC CAGCTCAGCC ACCTATTGGT TGTTTACGTT
  TAGGCTCATT TATCATCCTG GTGGTGCCTC GGTTTCTACT TGTATAGAAG GAGAATAATT
  TCAGCAAAGA CACGGTGACT TCTAGTCTGT GCCACTGGAC ATAGCACATA CAGACAACAG
  CCCCCAGAGA GGTCAGAAAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39198076	mCV24337837	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	A	A
ss139681771	ENSMUSSNP1069969	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	A		A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30556547					SNP	G	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:70439361 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Gm26908	predicted gene, 26908			1507 bp upstream
Sorbs3	sorbin and SH3 domain containing 3			Intron
				Noncoding-Transcript-Variant
Tssr126403	transcription start site region 126403			1482 bp upstream
Tssr129550	transcription start site region 129550			1496 bp downstream
Tssr129551	transcription start site region 129551			1543 bp downstream
Tssr129552	transcription start site region 129552			1555 bp downstream