rs30559709 SNP Detail

Summary

• ID
  rs30559709
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:96478345 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCGAG GCAGAACACA CGCCAAAGCC
  R
  CTTGCCGATG TTTAGAAGCC TGTAC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J	LG/J	SM/J
ss45443023	mCV22850532	ABI	CRAMUS_MOUSE	f	SNP	G	A
ss135516982	ENSMUSSNP1548036	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
ss320842114	CHEV_3_96374952	CHEVERUD	SCREENING_POP	f	SNP			A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J	LG/J	SM/J
rs30559709					SNP	G	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:96478345 () rs orientation: forward

Symbol	Name	Function Class
Cpgi13568	CpG island 13568	1014 bp distal
Rr581320	regulatory region 581320	586 bp distal
Rr581321	regulatory region 581321	within coordinates
Rr581322	regulatory region 581322	378 bp proximal