rs30561221 SNP Detail

Summary

• ID
  rs30561221
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:22037935 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GATGT GTGTCGCTGC TTGTCCAGCC
  S
  GGGCTCTGGC GAGGAAACTC ACTTC                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss39198480	mCV22932347	ABI	CRAMUS_MOUSE	f	SNP	G	G	C	C
ss139201794	ENSMUSSNP4075543	ENSEMBL	ENSEMBL_Sanger	f	SNP		G
ss324567171	CHEV_14_22807089	CHEVERUD	SCREENING_POP	f	SNP					C	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs30561221					SNP	G	G	C	C	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:22037935 () rs orientation: forward

Symbol	Name	Function Class
A330001L22Rik	RIKEN cDNA A330001L22 gene	1754 bp upstream
Cpgi6225	CpG island 6225	1181 bp distal
Cpgi6226	CpG island 6226	within coordinates
Cpgi6227	CpG island 6227	1052 bp proximal
Rr488632	regulatory region 488632	1675 bp distal
Rr488633	regulatory region 488633	1592 bp distal
Rr488634	regulatory region 488634	1647 bp proximal
Rr488635	regulatory region 488635	1724 bp proximal
Tssr127699	transcription start site region 127699	358 bp upstream
Tssr127700	transcription start site region 127700	294 bp upstream
Tssr127701	transcription start site region 127701	within coordinates
Tssr127702	transcription start site region 127702	18 bp downstream
Tssr127703	transcription start site region 127703	127 bp downstream
Tssr127704	transcription start site region 127704	547 bp downstream
Tssr127705	transcription start site region 127705	1608 bp downstream
Zfp503	zinc finger protein 503	within coordinates