rs30563729 SNP Detail

Summary

• ID
  rs30563729
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:106096164 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TTCCACAGAC ATCCTCTGAT CATGCTTCCT TGACGATCAA GCCATAGAGA TACTGGAGAA
  CATCTCCTGC TACGTTAGTT CAATTCTAGC CAAGAAATGT GTGTAGGTAT GTGCATGTGT
  AAGGAAAGTG TAATTGCTCA TTTTCACAAA TACTAATGAA GTCTCCTTGG ATGACCAAAC
  ATTACTCAGT TTTCTGAATT TTCTCTTAGA GTGTGATCTC AGCATTCAGG AGGTATAGAA
  AGTTCCAGGC CTGTAAATAA AGAAAATATC TAAGTAAAAA ACAAAACAAA ACAAAAACAA
  M
  AACAACAGCA ACAACAACAA CAAAAACACA AAGATTTAAA AAGAAGGAAA GAAAAGAAAG
  TTCCAGGCCA GGGTTACACA TAGTGAGACC CTGTAATTAA TTAATTAATA ATTAAGGCAC
  ACTGTGACTT AGTTGGCCAG AGTGTTGCTT AGCATTCAGG GATCTCTGAG TTCAGCCCTC
  AGCACTGCAT AGAGCAAAGG TATTCACTCA GGTTTGTAAT CCCAGCATGC CTGAGATACA
  GGCATCTCTG GTTCTGACAG AACTTGGCAC AAAGTATATT AACAAACATG CATGAAGCAA
                                                                   
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39198608	mCV24683565	ABI	CRAMUS_MOUSE	f	SNP	A	C	C	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30563729					SNP	A	C	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:106096164 () rs orientation: forward

Symbol	Name	Function Class
Gm48970	predicted gene, 48970	within coordinates
Gm63380	predicted gene, 63380	within coordinates
Rr294089	regulatory region 294089	145 bp proximal
Rr390111	regulatory region 390111	within coordinates
Tssr130160	transcription start site region 130160	450 bp downstream