rs30565371 SNP Detail

Summary

• ID
  rs30565371
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:95591234 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCTGG AAAGACCTAC TGTCTCCAAA
  R
  GAGGAGGTAG GTGCAGGGGT CCCTG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss45443276	mCV25061696	ABI	CRAMUS_MOUSE	f	SNP		G				A		G
ss46776239	NES10748005	PERLEGEN	MM_PANEL2	f	SNP	G	G	A	G	G		G	G	A	A	G	A	G	G
ss135512587	ENSMUSSNP5002244	ENSEMBL	ENSEMBL_Sanger	f	SNP		G						G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30565371					SNP	G	G	A	G	G	A	G	G	A	A	G	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46776239	NES10748005	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:95591234 () rs orientation: forward

Symbol	Name	Function Class
Adamtsl4	ADAMTS-like 4	within coordinates
Gm65708	predicted gene, 65708	1211 bp downstream
Rr581015	regulatory region 581015	831 bp distal
Tssr34517	transcription start site region 34517	601 bp downstream
Tssr34518	transcription start site region 34518	1665 bp downstream