rs30565926 SNP Detail

Summary

• ID
  rs30565926
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:32669302 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CATGCCCCAA ATGCAAGTGT TCTGGGAACA AACCCAGCAT
  TCTTCCTAGC ATAGCCTCAC CTCCACTGCA GGTTTTCCTT CATGAAGCTG AATGGATTGG
  R
  AGTATTGAAT CCAAAATCTC ACACTGTTGC CAGGGAAAGA GAAAAATGGT GTGTGATCAA
  TCGTTGTTCA ATCCACTTCC CTGGAAGAAA ACTTCAAAA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss45943109	mCV23925956	ABI	CRAMUS_MOUSE	f	SNP	A	A	A					G		A
ss51264463	NES13790667	PERLEGEN	MM_PANEL2	f	SNP	A		A	A	A	A	A		G	A	G	A		G	A	A	G		A
ss133101391	ENSMUSSNP1806672	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	A							A
ss321779074	CHEV_6_32642367	CHEVERUD	SCREENING_POP	f	SNP													A					G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs30565926					SNP	A	A	A	A	A	A	A	G	G	A	G	A	A	G	A	A	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51264463	NES13790667	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:32669302 () rs orientation: forward

Symbol	Name	Function Class
Rr379152	regulatory region 379152	751 bp downstream