rs30567283 SNP Detail

Summary

• ID
  rs30567283
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:3050503 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  ACTGAAAATC ATGGAAAATG AGAAACATCC ACTTGACGAC TTGAAAAATG ACGAAAATCA
  CTAAAATACG TGAAAAATGA GAAATGCACA CTGAAGGACC TGGAATATGG CGAGAAAACT
  GAAAATCACG GAAAATGAGA AATACACACT TTAGGACGTG AAATATGGCG AGGAAAACTG
  AAAAAGGTGG AAAATTTAGA AATGTCCACT GTAGGACATG GAATATGGCA AGAAAACTGA
  AAATCATGGA AAATGAGAAA AATCCACTTG ACGACTTGAA AAATGACGAA ATCACTAAAA
  W
  ACGTGAAAAA TGAGAAATGC ACACTGAAGG ACCTGGAATA TGGCGAGAAA ACTGAAAATC
  ACGGAAAATG AGAAATACAC ACTTTAGGAC GTGAAATATG GCGAGGAAAA CTGAAAAAGG
  TGGAAAATTT AGAAATGTCC ACTGTAGGAC GTGGAATATG GCAAGAAAAC TAGAAAATCA
  TGGAAAATGA GAAACATCCA CTTGACAACT TGAAAAATGA CGAAATCACT AAAAAACGTG
  AAAAATGAGA AATGCACACT GAAGGACCTG GAATATGGCG AGTAAACTGA AAATCACGGA
                                                                   
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46420207	mCV22802619	ABI	CRAMUS_MOUSE	f	SNP		A	T
ss46420239	mCV25359209	ABI	CRAMUS_MOUSE	f	SNP	T				A
ss46422432	mCV25258132	ABI	CRAMUS_MOUSE	r	SNP			A		T
ss46422709	mCV22820037	ABI	CRAMUS_MOUSE	f	SNP			A		T
ss46423103	mCV25356896	ABI	CRAMUS_MOUSE	r	SNP			T		A
ss46424333	mCV22792746	ABI	CRAMUS_MOUSE	f	SNP	A	T
ss46425666	mCV25388252	ABI	CRAMUS_MOUSE	f	SNP			T		A
ss46429936	mCV25356351	ABI	CRAMUS_MOUSE	f	SNP			A	T
ss46431513	mCV22804170	ABI	CRAMUS_MOUSE	f	SNP	A				T
ss46434944	mCV25168808	ABI	CRAMUS_MOUSE	r	SNP	A			T
ss46435068	mCV22824566	ABI	CRAMUS_MOUSE	r	SNP	A	T			A
ss46436694	mCV25353992	ABI	CRAMUS_MOUSE	f	SNP				A	T
ss46438361	mCV22780762	ABI	CRAMUS_MOUSE	r	SNP		T			A
ss46438829	mCV25391183	ABI	CRAMUS_MOUSE	r	SNP	T	A			T
ss46438926	mCV25356382	ABI	CRAMUS_MOUSE	f	SNP	T		A
ss46439184	mCV25172312	ABI	CRAMUS_MOUSE	r	SNP		T	A
ss46439259	mCV25360025	ABI	CRAMUS_MOUSE	r	SNP			T		A
ss46439495	mCV25358679	ABI	CRAMUS_MOUSE	r	SNP		T	A		A
ss46442163	mCV22851721	ABI	CRAMUS_MOUSE	f	SNP		A			T
ss46442584	mCV22814492	ABI	CRAMUS_MOUSE	r	SNP			A		T
ss46443056	mCV22980507	ABI	CRAMUS_MOUSE	f	SNP		T			A
ss46444761	mCV25340088	ABI	CRAMUS_MOUSE	r	SNP	A				T
ss46446750	mCV22980532	ABI	CRAMUS_MOUSE	f	SNP				T	A
ss46448023	mCV25356913	ABI	CRAMUS_MOUSE	r	SNP			T		A
ss46449983	mCV25356602	ABI	CRAMUS_MOUSE	r	SNP		T	A
ss46450984	mCV25366155	ABI	CRAMUS_MOUSE	r	SNP	T		A
ss46466934	mCV22814943	ABI	CRAMUS_MOUSE	f	SNP				A	T
ss46468794	mCV22819965	ABI	CRAMUS_MOUSE	r	SNP			T		A
ss46469965	mCV22826165	ABI	CRAMUS_MOUSE	r	SNP		A		T	T
ss46471191	mCV22821955	ABI	CRAMUS_MOUSE	f	SNP			A	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30567283					SNP	T	A	?	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:3050503 () rs orientation: forward

Symbol	Name	Function Class
Tssr4284	transcription start site region 4284	1823 bp downstream
Tssr4285	transcription start site region 4285	1798 bp upstream
Tssr4286	transcription start site region 4286	1694 bp downstream
Tssr4287	transcription start site region 4287	1659 bp upstream
Tssr4288	transcription start site region 4288	1631 bp downstream
Tssr4289	transcription start site region 4289	1536 bp upstream
Tssr4290	transcription start site region 4290	1529 bp downstream
Tssr4291	transcription start site region 4291	1449 bp upstream
Tssr4292	transcription start site region 4292	1413 bp downstream
Tssr4293	transcription start site region 4293	1378 bp upstream
Tssr4294	transcription start site region 4294	1376 bp downstream
Tssr4295	transcription start site region 4295	1303 bp upstream
Tssr4296	transcription start site region 4296	1340 bp downstream
Tssr4297	transcription start site region 4297	1276 bp upstream
Tssr4298	transcription start site region 4298	1258 bp downstream
Tssr4299	transcription start site region 4299	1218 bp downstream
Tssr4300	transcription start site region 4300	1180 bp downstream
Tssr4301	transcription start site region 4301	1162 bp upstream
Tssr4302	transcription start site region 4302	1150 bp upstream
Tssr4303	transcription start site region 4303	1095 bp downstream
Tssr4304	transcription start site region 4304	1066 bp upstream
Tssr4305	transcription start site region 4305	997 bp downstream
Tssr4306	transcription start site region 4306	978 bp upstream
Tssr4307	transcription start site region 4307	957 bp downstream
Tssr4308	transcription start site region 4308	925 bp upstream
Tssr4309	transcription start site region 4309	881 bp upstream
Tssr4310	transcription start site region 4310	834 bp downstream
Tssr4311	transcription start site region 4311	806 bp upstream
Tssr4312	transcription start site region 4312	726 bp downstream
Tssr4313	transcription start site region 4313	667 bp upstream
Tssr4314	transcription start site region 4314	655 bp downstream
Tssr4315	transcription start site region 4315	631 bp downstream
Tssr4316	transcription start site region 4316	604 bp upstream
Tssr4317	transcription start site region 4317	528 bp downstream
Tssr4318	transcription start site region 4318	504 bp upstream
Tssr4319	transcription start site region 4319	447 bp upstream
Tssr4320	transcription start site region 4320	383 bp downstream
Tssr4321	transcription start site region 4321	355 bp upstream
Tssr4322	transcription start site region 4322	256 bp downstream
Tssr4323	transcription start site region 4323	221 bp upstream
Tssr4324	transcription start site region 4324	191 bp downstream
Tssr4325	transcription start site region 4325	140 bp downstream
Tssr4326	transcription start site region 4326	102 bp upstream
Tssr4327	transcription start site region 4327	99 bp downstream
Tssr4328	transcription start site region 4328	17 bp downstream
Tssr4329	transcription start site region 4329	19 bp upstream
Tssr4330	transcription start site region 4330	84 bp upstream
Tssr4331	transcription start site region 4331	108 bp downstream
Tssr4332	transcription start site region 4332	214 bp downstream
Tssr4333	transcription start site region 4333	226 bp upstream
Tssr4334	transcription start site region 4334	248 bp downstream
Tssr4335	transcription start site region 4335	395 bp downstream
Tssr4336	transcription start site region 4336	399 bp upstream
Tssr4337	transcription start site region 4337	472 bp downstream