rs30568567 SNP Detail

Summary

• ID
  rs30568567
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:83482648 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTCACCAGT GAGGTACTTG
  GCAATTACTA TATTTGGAAG ACAGACAACC ACCCTCAACC TCTCATCTTA CTCATCAATA
  GCTCATCCAC TGTTTATTTA CCCCGCTTAA TTAATTTCTG TAGCTTTATT ATGTATCACT
  TCCTATTAAA GTGCAGAATT TTTATTTGAT CTGGTCATGG CTGTATCCGT AGGGTCAAGG
  M
  ACAGTGCCAG CACAGAGAAG ACACTCAAAG GGCGATTTGC TGAATGAATA AAACGAGAAA
  CTATTTGCTG CTAGAATGTC TTGAGCAGCC CACACCTGAT AGCATTATCA GCATCTGTGC
  AGAGCTAAGT ACCCTCAGAA TTCAGCAACA GTGAGTTGAG CCATTTTCCT TCCATGTTGC
  TTTTTTGTTT TTTAAGATAC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
ss45943500	mCV27581720	ABI	CRAMUS_MOUSE	f	SNP	C		A	A
ss133348060	ENSMUSSNP7186100	ENSEMBL	ENSEMBL_Sanger	f	SNP		A		A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
rs30568567					SNP	C	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:83482648 () rs orientation: forward

Symbol	Name	Function Class
Cpgi17605	CpG island 17605	836 bp proximal
Dguok	deoxyguanosine kinase	within coordinates
Rr399724	regulatory region 399724	1211 bp upstream
Tssr1908	transcription start site region 1908	1415 bp upstream
Tssr61663	transcription start site region 61663	590 bp downstream
Tssr61664	transcription start site region 61664	1150 bp downstream
Tssr61665	transcription start site region 61665	1164 bp downstream
Tssr61666	transcription start site region 61666	1172 bp downstream
Tssr61667	transcription start site region 61667	1199 bp downstream
Tssr61668	transcription start site region 61668	1223 bp downstream
Tssr61669	transcription start site region 61669	1229 bp downstream