rs30568886 SNP Detail

Summary

• ID
  rs30568886
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:83482116 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCCTT TTCTGATGAG AAACGCAAGA
  R
  TGGATGGAGG GTAGTGGAGG GAGAG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45943597	mCV27581715	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	A	A
ss133348042	ENSMUSSNP859446	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G		A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30568886					SNP	A	A	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:83482116 () rs orientation: forward

Symbol	Name	Function Class
Cpgi17605	CpG island 17605	1368 bp proximal
Dguok	deoxyguanosine kinase	within coordinates
Rr399724	regulatory region 399724	1743 bp upstream
Tssr1908	transcription start site region 1908	1947 bp upstream
Tssr61663	transcription start site region 61663	1122 bp downstream
Tssr61664	transcription start site region 61664	1682 bp downstream
Tssr61665	transcription start site region 61665	1696 bp downstream
Tssr61666	transcription start site region 61666	1704 bp downstream
Tssr61667	transcription start site region 61667	1731 bp downstream
Tssr61668	transcription start site region 61668	1755 bp downstream
Tssr61669	transcription start site region 61669	1761 bp downstream