rs30569651 SNP Detail

Summary

• ID
  rs30569651
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:51365115 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GACACCCAGA GGCACAGGTG CCACTAAGAT GAGCAAGTGA
  GTGGTGGAGA AATGGAAAAG AAAGAGAGAC ATAAGGATGT GTGCTCTATG AAGAGAGAGG
  R
  AACTGGAGAC TCAAAGGCAG TGAGGAACAG CCTAATGTGA ATAGCTTGTG GTCATGATGA
  GATCCTGGCC TGTGCTCCCA CTGAGAACCA TGTCTGGGT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
ss39198702	mCV23506923	ABI	CRAMUS_MOUSE	f	SNP	A		A					G		A
ss49182503	NES12491400	PERLEGEN	MM_PANEL2	f	SNP	A		A	A	A	G	A		G	A	G	A		G	A		G
ss139475179	ENSMUSSNP2496633	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	A
ss324621287	CHEV_14_51747333	CHEVERUD	SCREENING_POP	f	SNP													A			G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
rs30569651					SNP	A	A	A	A	A	G	A	G	G	A	G	A	A	G	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49182503	NES12491400	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:51365115 () rs orientation: forward

Symbol	Name	Function Class
Rnase6	ribonuclease, RNase A family, 6	within coordinates
Rr404085	regulatory region 404085	1020 bp upstream
Rr491778	regulatory region 491778	within coordinates
Rr491779	regulatory region 491779	1115 bp proximal
Tssr125412	transcription start site region 125412	1247 bp upstream
Tssr125413	transcription start site region 125413	1272 bp upstream
Tssr125414	transcription start site region 125414	1322 bp upstream
Tssr125415	transcription start site region 125415	1349 bp upstream
Tssr125416	transcription start site region 125416	1381 bp upstream
Tssr125417	transcription start site region 125417	1397 bp upstream
Tssr125418	transcription start site region 125418	1427 bp upstream
Tssr125419	transcription start site region 125419	1460 bp upstream