rs30574986 SNP Detail

Summary

• ID
  rs30574986
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:32363695 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAGAA GCATCTATGT TACACTGGCC
  R
  TCCTGCCCAT GCCACGGAGT GGTGC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
ss45943740	mCV23047924	ABI	CRAMUS_MOUSE	f	SNP	A	G	A
ss133099672	ENSMUSSNP3348618	ENSEMBL	ENSEMBL_Sanger	f	SNP	A		A
ss321777896	CHEV_6_32336760	CHEVERUD	SCREENING_POP	f	SNP				A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
rs30574986					SNP	A	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:32363695 () rs orientation: forward

Symbol	Name	Function Class
Plxna4	plexin A4	Intron
Rr628102	regulatory region 628102	1531 bp distal
Rr628103	regulatory region 628103	within coordinates
Rr628104	regulatory region 628104	1525 bp proximal