rs30580683 SNP Detail

Summary

• ID
  rs30580683
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:46811726 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGACT AGTTTAAAAA GTTGTTTCTC
  R
  TGCGAAACAG TGACTACACG CTCTT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39199791	mCV25349251	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	G
ss139387207	ENSMUSSNP2154875	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G		G
ss324590199	CHEV_14_47193944	CHEVERUD	SCREENING_POP	f	SNP					G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30580683					SNP	G	G	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:46811726 () rs orientation: forward

Symbol	Name	Function Class
Gm49319	predicted gene, 49319	within coordinates
Rr491231	regulatory region 491231	1000 bp distal
Rr491232	regulatory region 491232	307 bp distal
Rr491233	regulatory region 491233	1142 bp proximal
Rr491234	regulatory region 491234	1568 bp proximal
Rubie	RNA upstream of Bmp4 expressed in inner ear	within coordinates
Tssr128285	transcription start site region 128285	1580 bp downstream