rs30580911 SNP Detail

Summary

• ID
  rs30580911
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:126153090 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGAGG GGCAGGTTTC CTGGCCAGCA
  W
  CAGCTAGAGC ATTCTGGCAC AGCTG                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46423048	mCV24728075	ABI	CRAMUS_MOUSE	f	SNP	A	T	A	A
ss147407549	ENSMUSSNP3458036	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	T		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30580911					SNP	A	T	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:126153090 () rs orientation: forward

Symbol	Name	Function Class
Gm57069	predicted gene, 57069	784 bp downstream
Rr398487	regulatory region 398487	294 bp upstream
Rr599659	regulatory region 599659	1333 bp distal
Rr599660	regulatory region 599660	within coordinates
Tssr38986	transcription start site region 38986	1087 bp upstream