rs30582287 SNP Detail

Summary

• ID
  rs30582287
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:14649171 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTTGTCTCT TTAAAATACT
  TCTTGGATCA TATTCCCCAG AGTAGTATTC CTAGGTTAGA GGGTGTGACC ACATACAACT
  CCTCCCTAGC CTCCCTATTG CTTTCCAGAA AGATCTCTCA GCAAACAGGT TTTCCAGCCT
  CTGGAGACCT ATCCATCTTG CCAGGGGCCC AGACTGCTGC AGGAAGAAAT GGAGCCTAGG
  Y
  CTAGGGATAG ATGTCATAGG TAATGACCAG CCCAAAAAAA ATGTCATCTG GCTTGGACCT
  TGGTTCGCGT GTGTTGTCTT GTGCTTGCCA TGACAGTTTT TACTAGGGCC ACCCACTGTA
  TGTTCTGTTG ACTGTTCCCA TTGAATAGCC AGGATAATCA ATCAATTGAT ATCAATTAAT
  GTCCTTCTGA TAATGATCTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss49148864	NES12443652	PERLEGEN	MM_PANEL2	f	SNP	T	C	C	C	C	C	C	C	C	T	T	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30582287					SNP	T	C	C	C	C	C	C	C	C	T	T	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49148864	NES12443652	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:14649171 () rs orientation: forward

Symbol	Name	Function Class
Cpgi6153	CpG island 6153	1541 bp proximal
Flnb	filamin, beta	within coordinates
Rr296824	regulatory region 296824	within coordinates