rs30583463 SNP Detail

Summary

• ID
  rs30583463
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:3050566 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  GGAAAACTGA AAAAGTTGGA ATATTTAGAA ATGTCCTCTG TAGGACTTGA AATATGGCAA
  GAAAACTGAA AATCATGGAA AATGAGAAAC ATCCACTTGA CGACTTGAAA AATGACGAAA
  TCACTAAAAA ACGTGAAAAA TGAGAAATGC ACACTGAAGG ACCTGGAATA TGGCGAGAAA
  ACTGAAAATC ACGGAAAATG AGAAATACAC ACTTTAGGAC GTGCAATATG GCGAGGAAAA
  CTGAAAAAGG TGGAATATTT AGAAATGTCC ACTGTAGGAC GTGAAATATG GCAAGAAAAC
  Y
  AAAAATCATG GAAAATGAGA AACATCCACT TGACGACTTG AAAAATGACG AAATAACTAA
  AAAACGTTAA AAATGAGAAA TGCACACTGA AGGACCTGGA ATATGGCGAG AAAACTGAAA
  ATCACGGAAA ATGAGAAATA CACACTTTAG GACGTGAAAT ATGGTGAGGA AAACTGAAAA
  AGAGGAAAAT TTAGAAATTT CCACTGTAGG ACGTGGAATA TGGCAAGAAA ACTGGGAATC
  ATGGAAAATG AGAAACATCC A                                          
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss46422572	mCV22793267	ABI	CRAMUS_MOUSE	f	SNP	T		C
ss46450555	mCV22806039	ABI	CRAMUS_MOUSE	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs30583463					SNP	?	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:3050566 () rs orientation: forward

Symbol	Name	Function Class
Tssr4284	transcription start site region 4284	1760 bp downstream
Tssr4285	transcription start site region 4285	1735 bp upstream
Tssr4286	transcription start site region 4286	1631 bp downstream
Tssr4287	transcription start site region 4287	1596 bp upstream
Tssr4288	transcription start site region 4288	1568 bp downstream
Tssr4289	transcription start site region 4289	1473 bp upstream
Tssr4290	transcription start site region 4290	1466 bp downstream
Tssr4291	transcription start site region 4291	1386 bp upstream
Tssr4292	transcription start site region 4292	1350 bp downstream
Tssr4293	transcription start site region 4293	1315 bp upstream
Tssr4294	transcription start site region 4294	1313 bp downstream
Tssr4295	transcription start site region 4295	1240 bp upstream
Tssr4296	transcription start site region 4296	1277 bp downstream
Tssr4297	transcription start site region 4297	1213 bp upstream
Tssr4298	transcription start site region 4298	1195 bp downstream
Tssr4299	transcription start site region 4299	1155 bp downstream
Tssr4300	transcription start site region 4300	1117 bp downstream
Tssr4301	transcription start site region 4301	1099 bp upstream
Tssr4302	transcription start site region 4302	1087 bp upstream
Tssr4303	transcription start site region 4303	1032 bp downstream
Tssr4304	transcription start site region 4304	1003 bp upstream
Tssr4305	transcription start site region 4305	934 bp downstream
Tssr4306	transcription start site region 4306	915 bp upstream
Tssr4307	transcription start site region 4307	894 bp downstream
Tssr4308	transcription start site region 4308	862 bp upstream
Tssr4309	transcription start site region 4309	818 bp upstream
Tssr4310	transcription start site region 4310	771 bp downstream
Tssr4311	transcription start site region 4311	743 bp upstream
Tssr4312	transcription start site region 4312	663 bp downstream
Tssr4313	transcription start site region 4313	604 bp upstream
Tssr4314	transcription start site region 4314	592 bp downstream
Tssr4315	transcription start site region 4315	568 bp downstream
Tssr4316	transcription start site region 4316	541 bp upstream
Tssr4317	transcription start site region 4317	465 bp downstream
Tssr4318	transcription start site region 4318	441 bp upstream
Tssr4319	transcription start site region 4319	384 bp upstream
Tssr4320	transcription start site region 4320	320 bp downstream
Tssr4321	transcription start site region 4321	292 bp upstream
Tssr4322	transcription start site region 4322	193 bp downstream
Tssr4323	transcription start site region 4323	158 bp upstream
Tssr4324	transcription start site region 4324	128 bp downstream
Tssr4325	transcription start site region 4325	77 bp downstream
Tssr4326	transcription start site region 4326	39 bp upstream
Tssr4327	transcription start site region 4327	36 bp downstream
Tssr4328	transcription start site region 4328	within coordinates
Tssr4329	transcription start site region 4329	12 bp downstream
Tssr4330	transcription start site region 4330	147 bp upstream
Tssr4331	transcription start site region 4331	171 bp downstream
Tssr4332	transcription start site region 4332	277 bp downstream
Tssr4333	transcription start site region 4333	289 bp upstream
Tssr4334	transcription start site region 4334	311 bp downstream
Tssr4335	transcription start site region 4335	458 bp downstream
Tssr4336	transcription start site region 4336	462 bp upstream
Tssr4337	transcription start site region 4337	535 bp downstream