rs30583846 SNP Detail

Summary

• ID
  rs30583846
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:14653065 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGAAATGAGT AGAGCAAACA
  CCCCACCCAG GGCAGGGACA GGATGTAGAT TCTTCAGGCC TGAAATGTCA GGCTGTAGGT
  CTCACACGAT GGGTGTCCCA CACCCCAGTT GATTCTGCAT GCAGGATGAA GGCTGCCCCC
  CTCAGTCTGC AAGCACACAT CCATCCATTC ACCCACTCAC TCATCTGTCG TCTACATCTC
  R
  TATGGCAATT CTACACCAGG TACTCAGCTG TAGTTGAGAT CACTCTAGAC CTCTTGCTGG
  GGTATGCAGA CCAGCATGGA ACAGATATCA TTCATGTCAG ACACGTATCT TCAGTTTCTT
  CGAGACCTTA GATCTCCATC TGCTCCTCGA CACTGGGGGG CCAGGGGGGA GACAGCCAAG
  CTGAGCTGAG GGCTACCAGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss49148883	NES12443998	PERLEGEN	MM_PANEL2	f	SNP	G	A	A	A	A	A	G	A	A	G	G	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30583846					SNP	G	A	A	A	A	A	G	A	A	G	G	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49148883	NES12443998	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:14653065 () rs orientation: forward

Symbol	Name	Function Class
Cpgi6153	CpG island 6153	1005 bp distal
Flnb	filamin, beta	1249 bp upstream
Rr287260	regulatory region 287260	865 bp distal
Rr294575	regulatory region 294575	40 bp proximal
Rr294576	regulatory region 294576	383 bp proximal
Rr296824	regulatory region 296824	1064 bp distal
Rr404014	regulatory region 404014	999 bp downstream
Tssr124212	transcription start site region 124212	1266 bp upstream
Tssr124213	transcription start site region 124213	1296 bp upstream
Tssr124214	transcription start site region 124214	1347 bp upstream