rs30593407 SNP Detail

Summary

• ID
  rs30593407
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:134096710 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGGTATTTTT CTGTAAGTCC CATTGAGAGC TGGTGTTTTA
  ACGGAGGTCT TTTAAACACA CACACACACA CACACACACA CACACACACA CACACACACA
  M
  GGTTAAATAT GTACTTTGTA AATAAAGACC CCATGTGTTT GGTTGGTAGG ATGCTCCTTA
  AGACAGACTC CCATCAGACT TCAGAACTGA AGGGCAGAG                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss45944001	mCV24118098	ABI	CRAMUS_MOUSE	f	SNP	C	A	A
ss321976680	CHEV_6_134069765	CHEVERUD	SCREENING_POP	f	SNP				A	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs30593407					SNP	C	A	A	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:134096710 () rs orientation: forward

Symbol	Name	Function Class
D6Mit374a	DNA segment, Chr 6, Massachusetts Institute of Technology 374a	124 bp distal
D6Mit374b	DNA segment, Chr 6, Massachusetts Institute of Technology 374b	124 bp distal
Etv6	ets variant 6	within coordinates
Rr639573	regulatory region 639573	253 bp distal
Rr639574	regulatory region 639574	791 bp proximal