rs30595222 SNP Detail

Summary

• ID
  rs30595222
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:76474594 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTGGGACAT ATCAAGATTG
  GCATCAAATA AAATAAATTA AGATGCAACA AAATAAAATA TTAATAAATA TGCAAGGTTC
  TATGACAGCA TTACTACTGC AATGCACTGT GGTTACCTAT TCTATAAGAA ATCCTCAACC
  GCACGCTTGA ACATAGAAAC AAAAGCTTCA AAGCAGTGGG CTTGTCAGAA CAATGAAAGT
  K
  ATTAATAAGG TACTATGTAT TGCTGTAAAT ATTAGGAGAT AATTTTGAAA GTGAATATAA
  TATATAGAAC AAAGAAATGC ATAGGTAAAG GAAAAAAAGA ATAAACTCAT TACTGACAAT
  AAATTTTAGG AAAACAAATT ACATACATCA AGCTTTTTAT ATCAGGGTTA TATTTTTTAT
  CAGTTGATAT GTTTGAGTAA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J
ss45444606	mCV24200553	ABI	CRAMUS_MOUSE	f	SNP	G	T
ss135341130	ENSMUSSNP3970755	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J
rs30595222					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:76474594 () rs orientation: forward

Symbol	Name	Function Class
Fstl5	follistatin-like 5	Intron
Rr578399	regulatory region 578399	234 bp proximal