rs30599261 SNP Detail

Summary

• ID
  rs30599261
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:23348605 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GATGT GGCAGCCCAA CTATTCACCT
  Y
  GGAACATGAT CAGATCTATG GTACT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss44944319	mCV24771070	ABI	CRAMUS_MOUSE	f	SNP	T			C		T
ss60709297	NES16359927	PERLEGEN	MM_PANEL2	f	SNP	T	C	T		C	T	T	C	T	T	C	C
ss148754373	ENSMUSSNP1947674	ENSEMBL	ENSEMBL_Sanger	f	SNP	T					T
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30599261					SNP	T	C	T	C	C	T	T	C	T	T	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60709297	NES16359927	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:23348605 () rs orientation: forward

Symbol	Name	Function Class
Rr370991	regulatory region 370991	1757 bp downstream