rs30600234 SNP Detail

Summary

• ID
  rs30600234
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:189664768 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCATTAATGG CTCAAGTGCT
  GGGAAGTGGA CAAAAGCCAG TCTGCAGCGG GGTCAGATGA GAGAACCCGG GAAGAATCGA
  TTCTTTAGCA CCCAGGATCA CAACGATTCA CTCACACCAC ACGGTCTCCA GGCGCTGTGA
  CTTTAGTTCT GGGTTTAGCA TGTTGGGATT CTGCCTATAT TAGGTTTTTT TTTTCTTCTT
  Y
  CCCAGGAGCT AATAAATGAA AATCAAAAAA AAAAAAATTC CTATGTGTAA GTTTCTTTGC
  CCTTATTTTT TTGAACTGAA AAATAAAGAA ACGGTAAATT CTCTCCCTGA GCCGACCTAC
  TCGCTGGGCA TGCCGCCATG TAGAAATCTT AATAATACAT TCGGTGCATG CCGTTTAAAA
  ACAGAAGATC TTGGTTGGCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss44943765	mCV25137707	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	C	C
ss146492808	ENSMUSSNP6465860	ENSEMBL	ENSEMBL_Sanger	f	SNP			T		C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30600234					SNP	C	C	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:189664768 () rs orientation: forward

Symbol	Name	Function Class
Gm70902	predicted gene, 70902	within coordinates
Rr425891	regulatory region 425891	796 bp proximal