rs30603082 SNP Detail

Summary

• ID
  rs30603082
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:20749278 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  CATAACTACG CTGAAATCTC TAGTGGCCTT TGGGGGAGCC TTGGGGTCCT TGATCTCAGA
  CTGAAGTGTA TAGGGGGAAA TTTGTTCCCA ACAAGCTCTG CCTGTTAGGC CAAGATGGCA
  CCTTACTCCA GGATAGTTTC TGGGAGTGTA GAATGGATGA AGTCAGGTCC CAGAGATTCT
  TCACACTTCT CACTTGTGCA AGGAAGAAAG CAGCTTTTCC TTCTGCGTGA CAAGTGCCTC
  GGAGGACACT GCTTCCCCAG GCCACATGCT TCTTTATATC CTCATAGATA TCTCAGCACT
  R
  TGGAATGTAA GGAAGTGTGT GGTTTTGGCA AGTGCTTCTT CAAGGCCGAT GGCTCCACCC
  AGAGAATATG CTGTTGACTT CTTCGTTCCT TGGCTACATT TTCTTACCTG CAGGTGCCCT
  CTTCCCCAGA AATCTACCTC TACAGACTTC TCCCACAATA CTGGGTTTCA GGTCAACTAT
  GCTCCCCATC CTAGCCCCTT TATACCAACA TCCTTCACAT CTACTCTCAG GGAATCAGCT
  CCCGGGGTCC TAGTTCCTTC CTCTGCTCAT ATGGCTCCTG CAATGGATGT TTCTACCAAG
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss44944365	mCV23184359	ABI	CRAMUS_MOUSE	f	SNP	A	G	A
ss148720379	ENSMUSSNP2569370	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs30603082					SNP	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:20749278 () rs orientation: forward

Symbol	Name	Function Class
Lincmd1	long intergenic non-protein coding RNA of muscle differentiation 1	within coordinates
Mir206	microRNA 206	within coordinates
Mirc37	microRNA cluster 37, including Mir133b through Mir206	within coordinates