rs30603194 SNP Detail

Summary

• ID
  rs30603194
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:115434705 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTAACTCTCA GACAAGCCCA
  GGTACCTGGA AAAAAGCAGA AATAAGACTA GCAGACTCAG AGATCAGCCA AACTAGAAGA
  AACAAAAAAA CAGCTGAGCT TCCTTAAGAG GCTTAGATCA CCTGAAAAGG GGACTCCCTC
  ACCTGGTGAG CTAGTGTCCT GCAGCTTCCC AGAACTGGCT CCCACCCTGA GATGGAGTTT
  K
  GTGATGCAGC TTTCTTTGAG TGGTTTCTTT CTGTAACTGC TCACCATACT CCTGCAAGTA
  ACACCAATAA AAAAGCCATT GGTTCACCAA ACTTTGATGT GTTGTTCATT CCCTGTCTGG
  GTTATATAGA TATTCAGATC TCTACCAATA AAATAAATAA ATAAATAAAT AAATAAATAA
  AGCCTGTCAC CCAGCAATCT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45445953	mCV24998072	ABI	CRAMUS_MOUSE	f	SNP	G	T	T	T
ss135663611	ENSMUSSNP4967891	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	T		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30603194					SNP	G	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:115434705 () rs orientation: forward

Symbol	Name	Function Class
Gm40124	predicted gene, 40124	within coordinates
Rr65099	regulatory region 65099	within coordinates
Rr367536	regulatory region 367536	1273 bp upstream
Rr367537	regulatory region 367537	1672 bp upstream
Tssr35264	transcription start site region 35264	454 bp downstream
Tssr35265	transcription start site region 35265	487 bp downstream