rs30603566 SNP Detail

Summary

• ID
  rs30603566
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:55207053 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCCTT TCCTTCTTCC TTCCTTATTT
  Y
  GTTCTCTGTT CTCCCTCCCC TGCTG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss39202784	mCV23144781	ABI	CRAMUS_MOUSE	f	SNP		C					T		C
ss52723007	NES15567955	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C		C	C	C	C		T	C	C	C		C
ss139574369	ENSMUSSNP3380290	ENSEMBL	ENSEMBL_Sanger	f	SNP		C							C
ss324641238	CHEV_14_55588433	CHEVERUD	SCREENING_POP	f	SNP												C					C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs30603566					SNP	C	C	C	C	C	C	T	C	C	C	C	C	T	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52723007	NES15567955	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:55207053 () rs orientation: forward

Symbol	Name	Function Class
Mhrt	myosin heavy chain associated RNA transcript	within coordinates
Myh7	myosin, heavy polypeptide 7, cardiac muscle, beta	1088 bp downstream
Rr407057	regulatory region 407057	1813 bp distal
Rr492380	regulatory region 492380	791 bp distal
Rr492381	regulatory region 492381	65 bp proximal
Tssr125718	transcription start site region 125718	913 bp downstream
Tssr125719	transcription start site region 125719	821 bp downstream
Tssr125720	transcription start site region 125720	796 bp downstream
Tssr125721	transcription start site region 125721	784 bp downstream
Tssr125722	transcription start site region 125722	336 bp downstream
Tssr125723	transcription start site region 125723	294 bp downstream
Tssr125724	transcription start site region 125724	254 bp downstream
Tssr125725	transcription start site region 125725	571 bp upstream
Tssr125726	transcription start site region 125726	596 bp upstream
Tssr125727	transcription start site region 125727	629 bp upstream
Tssr125728	transcription start site region 125728	1437 bp upstream
Tssr128746	transcription start site region 128746	1621 bp upstream
Tssr128747	transcription start site region 128747	1597 bp upstream
Tssr128748	transcription start site region 128748	1553 bp upstream
Tssr128749	transcription start site region 128749	1522 bp upstream
Tssr128750	transcription start site region 128750	1500 bp upstream
Tssr128751	transcription start site region 128751	1494 bp upstream
Tssr128752	transcription start site region 128752	1435 bp upstream
Tssr128753	transcription start site region 128753	1236 bp upstream
Tssr128754	transcription start site region 128754	1166 bp upstream
Tssr128755	transcription start site region 128755	1119 bp downstream
Tssr128756	transcription start site region 128756	1136 bp downstream