rs30605458 SNP Detail

Summary

• ID
  rs30605458
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:51364802 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCAGATCTTC CAAATTGTCC TCTGATCGAC ACACACGCCC
  CATGACACAA GTTTGTGTGT GTGTGTGTGA GCGGCAGTGT CAAAACATAT ACACTAAATA
  Y
  ATATAAACAA AACCAAAACA TATATATAAA TTAAATGCAT AATTAAAAAG AGAGGAGGCA
  AGAGTGTGAT CAGAGTGGAG TCTGTGTAGG TTTATAGCA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39202410	mCV23506912	ABI	CRAMUS_MOUSE	f	SNP		C	T	C
ss139475173	ENSMUSSNP5218432	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C		C
ss324621285	CHEV_14_51747020	CHEVERUD	SCREENING_POP	f	SNP					C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30605458					SNP	C	C	T	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:51364802 () rs orientation: forward

Symbol	Name	Function Class
Rnase6	ribonuclease, RNase A family, 6	within coordinates
Rr404085	regulatory region 404085	1333 bp upstream
Rr491778	regulatory region 491778	130 bp proximal
Rr491779	regulatory region 491779	1428 bp proximal
Tssr125412	transcription start site region 125412	1560 bp upstream
Tssr125413	transcription start site region 125413	1585 bp upstream
Tssr125414	transcription start site region 125414	1635 bp upstream
Tssr125415	transcription start site region 125415	1662 bp upstream
Tssr125416	transcription start site region 125416	1694 bp upstream
Tssr125417	transcription start site region 125417	1710 bp upstream
Tssr125418	transcription start site region 125418	1740 bp upstream
Tssr125419	transcription start site region 125419	1773 bp upstream