rs30606855 SNP Detail

Summary

• ID
  rs30606855
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:153564276 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATATAAAAG TTACTGGGTG
  TGTTTCAGGC ACCAAAGCTG TTTCTGCACC TTTATAGGGC ACCATCATGT ACAGCTAACG
  TGATAACGGA CCTCAAGCAG CTTTGTACAC TCAGTGCACA CGGCCTGCTA TATGCACTTG
  ACTGTGGTAG TTAAGGGAAG GTCTGTAAGA GGGAGGGATG CACAGTTCTC AGAGAAGGCA
  M
  GCTCACTGCC AGCACAGACC AGGAATGCTT ACAGATGACA GAGAATCTAG AGCCAGTCTT
  GACTGATAGA AGTGCCCAAA GTGGAGGGTT CTGGGTAGAC AAAGAGCTAA AGTAGAGACC
  TGGAACACAA TCAGGGAGAT GACACGCGAC AGAGATGCAA ATTATGTGAA ACTGACGTAG
  GGTCAGGGTG GCGTAAGCAA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47465725	NES10335936	PERLEGEN	MM_PANEL2	f	SNP	A	C	C	C	A	C	A	C	C	C	C	C	C	A	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30606855					SNP	A	C	C	C	A	C	A	C	C	C	C	C	C	A	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47465725	NES10335936	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:153564276 () rs orientation: forward

Symbol	Name	Function Class
Msh4	mutS homolog 4	within coordinates