rs30608755 SNP Detail

Summary

• ID
  rs30608755
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:9673719 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACACGGTGCA TGAACCTCAA
  CGCAGTTTGT TTTGTCCAAT AGCGTGCTTA GAAGCTCAGC CAGACAGTTG TGTAATAATA
  AACCCTTTAT CTTCTGAAGA TACAAAAAAA CGGAAAGATC GCTCGTTGCG GTAGCGCGGA
  TGAGGACCTG GTGAAATTTT TCAGCTGAAA GTCACATTCA TTTTAAATGC TACCCCTCTC
  Y
  CTCCCCACAA CACAAACACC TTCCCCGCCT TCCTCTTTTG TAATCTTAAG GGGGCGGAGG
  GTAAGTGCTT AGGATGTCCA GTTTAAGGAG GGCGAGGAGA AACACGGGGA TGGGGGAGGG
  GCAAAAAGCT CGCGGAAACC AAGGTCTAGG TTGTTGCTGC ACAGGCTCCC AACTCCTTCA
  CAAGTGCCTG TGATGGAACC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J
ss45448699	mCV23605671	ABI	CRAMUS_MOUSE	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J
rs30608755					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:9673719 () rs orientation: forward

Symbol	Name	Function Class
Cpgi12974	CpG island 12974	within coordinates
Gm56803	predicted gene, 56803	104 bp upstream
Rr69501	regulatory region 69501	1882 bp proximal
Rr78141	regulatory region 78141	within coordinates
Tssr28346	transcription start site region 28346	144 bp upstream
Tssr28347	transcription start site region 28347	167 bp upstream
Tssr32578	transcription start site region 32578	1374 bp downstream
Tssr32579	transcription start site region 32579	1415 bp downstream
Tssr32580	transcription start site region 32580	1431 bp downstream
Tssr32581	transcription start site region 32581	1574 bp downstream
Zfp704	zinc finger protein 704	within coordinates