rs30609484 SNP Detail

Summary

• ID
  rs30609484
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:153561030 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGACGCAGCT CTACTTTACA
  CCTGCGTGCT GGGCTGCTCC ACTCCTGCCC CCATGCTGCC CTGCTTCTCA TGTCTCCTCC
  CAACCTGCCA ACACCTGCCC CTCTTCTGTG CCCTCTTACA AAGGTGTCAT AAACCTGAAT
  AATCTGGTTT TAAGGATAAT ACATAAAATA ATCCATTGGA GAACTAATTA AGATGCAATG
  R
  ATGGAGCCAG GAACATATCT TTATGGAACA TATCTTTAAT CCCAGCACTT GGGAGGCAGA
  GACAGGCAGA GACAAGGCCA GCCTGGTCTA CACAGTGAAT GAGTTCCAGG ACAGCCAGTG
  CTACATGGTT GTATTCTGTC TCAAAAGGTA CAAAAAGAAA AAAAAAAAAA GAAAGCAAAA
  AAAAAAAAAA ATAAGCAGCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47465755	NES10335953	PERLEGEN	MM_PANEL2	f	SNP	A	G	G	G	A	G	A	G	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30609484					SNP	A	G	G	G	A	G	A	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47465755	NES10335953	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:153561030 () rs orientation: forward

Symbol	Name	Function Class
Asb17	ankyrin repeat and SOCS box-containing 17	1778 bp downstream
Msh4	mutS homolog 4	1753 bp downstream