rs30609970 SNP Detail

Summary

• ID
  rs30609970
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:78871363 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  GATTCTTTGG AGCCATCAAA CATGAAAAAG ACTTAAGTAT TATCTTAAAG ATATTCAAGA
  TATTTTTGTA GACAATGAAA ATAATGTCTT GTTTATTTTT TTAATCAATG TGATACTAAC
  CTAGACACAC CAAGGAAGAG AGCATTACAA CAGAGGGCTC TCCTCCATCT AATTGGCCTG
  TGGAATGTCT CTGGGCATTT TCTTGATTTC TAATTGATGT AGGAGGGCCC AGGCCACTGT
  GGTCCTTAGA TAGGTGGGTG TGAATTGTAT TAGAAAGGGA GATGATCACG CCAGTACACC
  S
  ATGGTCTCTG CTTCAGTTCC TGCCTCCAGG TTCTTCCCTT GAGTCTCTCT CTGCCTTGCA
  TTCTCTGGAC GATGGTTTGG TGAAACAAGC CCACTCCTTC CCAAGTTGCT TTCGGACATG
  GTGTTTATCA CAGCAACAGA GACATGGATA GCAAGCTACC ATCTGGGGGC AGAAGCTGAA
  ATATTATCAC CAGGGAAGGG GAGTGGATGC CATTTAAGAT ACTAATGAGA GTATCTGGCT
  CGGAGATAGA GGCGGTATAG CTGCATTGTA TACCATGCCC CTAGTGAAGA CATGAGAGCA
                                                                   
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45447369	mCV24563851	ABI	CRAMUS_MOUSE	f	SNP	G	G	C	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30609970					SNP	G	G	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:78871363 () rs orientation: forward

Symbol	Name	Function Class
Gm65474	predicted gene, 65474	within coordinates
Gm66687	predicted gene, 66687	1398 bp downstream
Rr578452	regulatory region 578452	340 bp proximal