rs30613745 SNP Detail

Summary

• ID
  rs30613745
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:122581941 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATCAATAAGA TGTCCTCAGA
  CATAACCCGA ATGCCGGTCT GATCAAGGCA ATTCCCCATT GAGTCTCCCT GAGATAATAA
  CTCTGGGCTG TGCCAAGCTG TCAGCTCTAG CTAATTAGAA GAAGAAAGAA TTGGGCTGGA
  AAGACAGCTC AGTGGTTAAG AGCAATGGCT GCTCTCCCAG GGTCAGGTTC CAGCATCCAC
  M
  TGGCAGCTCA CAACTGTCTA TAACTCCTGT TCCAAGGGAT TTGACACCCT GTACAGACAT
  ATATACAGTC AAAACACCAA TGCACATAAA ATAGAATTAT TTCTATATAT AATTTTATAA
  TACATATATT TATATATATA AATTATTTTT TAAAAAATAG GGGGCTGGAG AGATGGCTCA
  GAGGTTAAAA GCACTGACTG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45948397	mCV22300211	ABI	CRAMUS_MOUSE	f	SNP	A	A	C	C
ss133609470	ENSMUSSNP6468530	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A		C
ss321934197	CHEV_6_122555000	CHEVERUD	SCREENING_POP	f	SNP					A	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30613745					SNP	A	A	C	C	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:122581941 () rs orientation: forward

Symbol	Name	Function Class
Gdf3	growth differentiation factor 3	421 bp downstream
Rr380021	regulatory region 380021	1738 bp upstream
Rr399900	regulatory region 399900	571 bp downstream
Tssr62926	transcription start site region 62926	1870 bp upstream
Tssr62927	transcription start site region 62927	569 bp upstream
Tssr62928	transcription start site region 62928	1564 bp downstream