rs30615753 SNP Detail

Summary

• ID
  rs30615753
• Variation Type
  SNP
• Alleles
  A/G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:153537140 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGTGAGCCT GAGACCACCA
  CCAGTCTGTC ACCACAGGGC CTGGACAGGG AACTAGGTTG AGATGACTAC CAAGACAGTG
  CCAGGTAGGC CTGGACAGGC TCCCAGGACA GGAAGCAAGC CAAAGGCGGG AAGAAGCCAA
  CCTGGGACAG CAGGCCCCAG GCAGGAGTGA GCCCAAGACA AATGGCCGCA CAGGTGGGCC
  D
  GTAGAGGAGC TGGCCTGAGA TGAACACTAA TCTGTCGCCC TCCAGGCCTA GAGGGTGGGG
  ACAGATCATG CCCAAGATGA CTCCTGCCCT GTGCCATATT GCACAAGCAG GGCATAGCAC
  TCCTGAGACC TCTCCTGAGA CGACCTCAGA CCCTGAGCCA CCCGGGCACC ACTAAGAGGA
  GCAAGCGAGT CGTGGAGAAA                                            
  
  D = A/G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss47466004	NES10336111	PERLEGEN	MM_PANEL2	f	SNP		G	G	G	G	G	G	G	G	G	G	T
ss136113984	ENSMUSSNP82800	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G				G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs30615753					SNP	A	G	G	G	G	G	G	G	G	G	G	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47466004	NES10336111	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:153537140 () rs orientation: forward

Symbol	Name	Function Class
Gm25757	predicted gene, 25757	211 bp downstream
Rr587767	regulatory region 587767	893 bp distal
Rr587768	regulatory region 587768	750 bp distal
Rr587769	regulatory region 587769	559 bp distal
Rr587770	regulatory region 587770	within coordinates
Rr587771	regulatory region 587771	278 bp distal
Rr587772	regulatory region 587772	307 bp proximal