rs30615970 SNP Detail

Summary

• ID
  rs30615970
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:71247061 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACACA CACACACACA CACACACGAT
  W
  ATGAGCAGAT CTTTAGGAAC ACCAC                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss45948491	mCV22321298	ABI	CRAMUS_MOUSE	f	SNP	T	T	A
ss321817316	CHEV_6_71220071	CHEVERUD	SCREENING_POP	f	SNP				A	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs30615970					SNP	T	T	A	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:71247061 () rs orientation: forward

Symbol	Name	Function Class
Cpgi17522	CpG island 17522	1325 bp proximal
Krcc1	lysine-rich coiled-coil 1	1600 bp upstream
Mir8112	microRNA 8112	1594 bp upstream
Rr379579	regulatory region 379579	177 bp downstream
Rr379580	regulatory region 379580	644 bp upstream
Tssr56988	transcription start site region 56988	797 bp upstream
Tssr56989	transcription start site region 56989	1498 bp upstream
Tssr56990	transcription start site region 56990	1595 bp upstream
Tssr61348	transcription start site region 61348	637 bp downstream
Tssr61349	transcription start site region 61349	654 bp downstream
Tssr61350	transcription start site region 61350	1404 bp downstream