rs30616310 SNP Detail

Summary

• ID
  rs30616310
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:54690810 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGAGAATATT TTGAACTGGG
  GGAAAGGCTA TCCTTGTGAT GCTGGGGTTT AATAAAGGTA GTCAGCCTGA AGTCATATAG
  AAAGTAGGAA ACCTAGCTAA TGAAAGTCAG GAGAGATTCA GGTAGCATGT TGGAGGCCAC
  ACCTGGTATC TGTGCTCCTG GTCTAGGTAC TTACATTTGG TTGTGGTCCA GGTCTTAAGG
  Y
  CGTAGCTGCG TCCACATTCA TCTGAAGGCT TGCCTCCAGA GGGATCATTC CTCCTGTGCC
  TGACATGTTT GCCCTAGGCC GTGGTGGGAG CTTCTGTTCT TTACCTGAAG ACATGTTGGG
  CTTCTTGAAT GTCCCACAAC ATGGCAGCTA GCTTCCCTCA AATGAGTGAC CCTAAAGACA
  GCAAAGTAGA AAACCAACGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39204136	mCV25238853	ABI	CRAMUS_MOUSE	f	SNP	C	C	T
ss139563111	ENSMUSSNP6072413	ENSEMBL	ENSEMBL_Sanger	f	SNP	C			T
ss324637296	CHEV_14_55072190	CHEVERUD	SCREENING_POP	f	SNP					C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30616310					SNP	C	C	T	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:54690810 () rs orientation: forward

Symbol	Name	Function Class
Rr299430	regulatory region 299430	1192 bp proximal
Rr389675	regulatory region 389675	within coordinates