rs30617595 SNP Detail

Summary

• ID
  rs30617595
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:129406590 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAAGGAGCCT TGTCAGCAGC
  TGGCCTGGGG ACTCCTCTAT TGTTTCCTGT TTTGGATCAA GTCCAAAAGT GAAAGTCATT
  GCTTTTTGCG CTGCTGAGTT GCCCAGCTAT TTGGGTGACT CTGTTCTCTT ACTAGAGGAC
  CCGAGTGGAG GCGCATGCTC GGTGCGCGCA CGGTGTGCGA GGGAGCGAGC GCATTTTCTG
  Y
  GGTAACCTCT CGTGCTCGGG CTGACTCTGT CGGCTGCAGT GATTGGGAAA CTGCTTTGCG
  GCACCGGCTG CTCAGAGCCC ACCCCACCCA AGCCTTCTGC AGAACGTACA GTACGGGCCA
  GGAAAGGCAG TGCCGAAGTG GAGGGAGGAA GACGTCTTCC ATGTTTAATG GGGAATGTTT
  GCTGTTCCAA CACTTGTTTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	PWD/PhJ
ss46966169	NES10875706	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	PWD/PhJ
rs30617595					SNP	C	C	C	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46966169	NES10875706	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:129406590 () rs orientation: forward

Symbol	Name	Function Class
Elovl6	ELOVL fatty acid elongase 6	within coordinates
Rr585045	regulatory region 585045	within coordinates
Rr585046	regulatory region 585046	1316 bp proximal
Tssr31647	transcription start site region 31647	73 bp downstream
Tssr35617	transcription start site region 35617	953 bp downstream