rs30619498 SNP Detail

Summary

• ID
  rs30619498
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:12501485 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        GCAGT CTCTGTACCA TTGAACTGTG
  Y
  CATCCCAGAG CCGTTGCCAT GGACA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46426211	mCV25259464	ABI	CRAMUS_MOUSE	f	SNP		C	T	C
ss145184193	ENSMUSSNP3826251	ENSEMBL	ENSEMBL_Sanger	r	SNP	A	G
ss325304135	CHEV_17_12475464	CHEVERUD	SCREENING_POP	r	SNP					A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30619498					SNP	T	C	T	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:12501485 () rs orientation: reverse

Symbol	Name	Function Class
Map3k4	mitogen-activated protein kinase kinase kinase 4	within coordinates
Rr392297	regulatory region 392297	490 bp upstream