rs30621123 SNP Detail

Summary

• ID
  rs30621123
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:55207927 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTAAA TCCTGTTTCA ACCTGACAGG
  Y
  ACTGGGCCTG GGGAAGTCAC AAAGG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss39204292	mCV23144755	ABI	CRAMUS_MOUSE	f	SNP	T	T	T					C		T
ss52722999	NES15567963	PERLEGEN	MM_PANEL2	f	SNP	T		T	T	T	T	T		T	T	T	T		C	T	T	T		T
ss139574393	ENSMUSSNP4493386	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	T							T
ss324641246	CHEV_14_55589307	CHEVERUD	SCREENING_POP	f	SNP													T					T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs30621123					SNP	T	T	T	T	T	T	T	C	T	T	T	T	T	C	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52722999	NES15567963	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:55207927 () rs orientation: forward

Symbol	Name	Function Class
Mhrt	myosin heavy chain associated RNA transcript	within coordinates
Myh7	myosin, heavy polypeptide 7, cardiac muscle, beta	214 bp downstream
Rr492380	regulatory region 492380	1665 bp distal
Rr492381	regulatory region 492381	309 bp distal
Tssr125718	transcription start site region 125718	1787 bp downstream
Tssr125719	transcription start site region 125719	1695 bp downstream
Tssr125720	transcription start site region 125720	1670 bp downstream
Tssr125721	transcription start site region 125721	1658 bp downstream
Tssr125722	transcription start site region 125722	1210 bp downstream
Tssr125723	transcription start site region 125723	1168 bp downstream
Tssr125724	transcription start site region 125724	1128 bp downstream
Tssr125725	transcription start site region 125725	287 bp downstream
Tssr125726	transcription start site region 125726	263 bp downstream
Tssr125727	transcription start site region 125727	236 bp downstream
Tssr125728	transcription start site region 125728	563 bp upstream
Tssr125729	transcription start site region 125729	1437 bp upstream
Tssr128755	transcription start site region 128755	245 bp downstream
Tssr128756	transcription start site region 128756	262 bp downstream