rs30622177 SNP Detail

Summary

• ID
  rs30622177
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:96538438 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTTCAAATTT ACAGTCATTC CGAGCTCTTA ATTCCAACTG
  AGAGGAAAAC AGATAAATGT GTTATTTATG CCATGATGAT ACACAATAAA ATAGTGATCC
  R
  TGGCCTGTAA ACTAAAAGGG AGGTGACAGC AATGGCATAC TGGCTAAAAG GTATATAAAG
  AACAGCTTTT TCTTTCAGAC TCACATTGTG ACTCTGAGA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45948734	mCV23979801	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	A
ss133411756	ENSMUSSNP3323251	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30622177					SNP	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:96538438 () rs orientation: forward

Symbol	Name	Function Class
Gm26011	predicted gene, 26011	615 bp upstream
Tafa1	TAFA chemokine like family member 1	within coordinates